| Game Date | Conference | Road Team | Score |
| Home Team | Score | Status | Box Score | Recap | Commentary |
| National Collegiate Baseball Writers Poll |
| 4/29/2009 |
| #2 Arizona State | 20 | at | Arizona | 3 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Texas A&M-Corpus Christi | 2 | at | #3 Rice | 14 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Tulane | 2 | at | #5 LSU | 13 | FINAL | Box Score | Recap | 7 innings, run rule (makeup of 4/28 game) |
| 4/29/2009 |
| Southern California | 9 | at | #6 Cal State Fullerton | 3 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Jacksonville State | 16 | at | #7 Georgia | 8 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Arkansas-Pine Bluff | 2 | at | #8 Mississippi | 22 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Florida Gulf Coast |
| at | #13 Miami, Florida |
| Canceled | | Recap | CCD, scheduling conflicts |
| 4/29/2009 |
| #16 Cal Poly | 4 | at | St. Mary's | 7 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Houston Baptist |
| at | #18 TCU |
| Canceled | | Recap | CCD, field conditions |
| 4/29/2009 |
| Wake Forest | 5 | at | #22 Coastal Carolina | 18 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| North Dakota | 1 | at | #23 Kansas State | 22 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| UTSA | 7 | at | #24 Baylor | 8 | FINAL | Box Score | Recap | makeup of 4/28 game |
| 4/29/2009 |
| Akron | 3 | at | #25 Ohio State | 7 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Bacone |
| at | #26 Oklahoma State |
| Canceled | | Recap | CCD, rain |
| 4/29/2009 |
| South Alabama | 3 | at | #27 Alabama | 14 | FINAL | Box Score | Recap | 8 innings, run rule |
| 4/29/2009 |
| Rider | 13 | at | #28 George Mason | 6 | FINAL | Box Score | Recap | |
| America East Conference |
| 4/29/2009 |
| Holy Cross | 4 | at | Maine | 10 | FINAL | Box Score | Recap | makeup of 4/22 game (Sanford, ME) |
| 4/29/2009 |
| Manhattan | 15 | at | Albany | 13 | FINAL | Box Score | Recap | 12 innings |
| 4/29/2009 |
| Stony Brook | 14 | at | Fairfield | 6 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Vermont | 10 | at | Massachusetts | 4 | FINAL | Box Score | Recap | |
| Atlantic 10 Conference |
| 4/29/2009 |
| George Washington | 6 | at | William and Mary | 7 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Kent State | 14 | at | Duquesne | 12 | FINAL | Box Score | Recap | 7 innings |
| 4/29/2009 |
| Kent State | 13 | at | Duquesne | 0 | FINAL | Box Score | Recap | 7 innings |
| 4/29/2009 |
| Lafayette | 10 | at | Temple | 6 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| LaSalle | 3 | at | Penn State | 9 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Niagara | 2 | vs | St. Bonaventure | 4 | FINAL | Box Score | Recap | Big Four Classic, Buffalo, NY |
| 4/29/2009 |
| Rhode Island | 6 | at | Siena | 7 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| St. Joseph's | 7 | at | New Jersey Tech | 10 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Vermont | 10 | at | Massachusetts | 4 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Xavier | 3 | at | Cincinnati | 19 | FINAL | Box Score | Recap | |
| Atlantic Coast Conference |
| 4/29/2009 |
| Florida Gulf Coast |
| at | #13 Miami, Florida |
| Canceled | | Recap | CCD, scheduling conflicts |
| 4/29/2009 |
| Wake Forest | 5 | at | #22 Coastal Carolina | 18 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Dartmouth | 0 | at | Boston College | 3 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Maryland | 8 | at | West Virginia | 7 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Radford | 4 | at | Virginia Tech | 10 | FINAL | Box Score | Recap | makeup of 3/3 game |
| Atlantic Sun Conference |
| 4/29/2009 |
| Florida Gulf Coast |
| at | #13 Miami, Florida |
| Canceled | | Recap | CCD, scheduling conflicts |
| 4/29/2009 |
| Bethune-Cookman | 2 | at | Jacksonville | 3 | FINAL | Box Score | Recap | 10 innings |
| 4/29/2009 |
| Florida International | 3 | at | Stetson | 7 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Georgia Southern | 10 | at | Kennesaw State | 13 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Georgia Southern | 12 | at | Kennesaw State | 6 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Murray State | 12 | at | Belmont | 3 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Western Kentucky | 9 | at | Lipscomb | 3 | FINAL | Box Score | Recap | |
| Big 10 Conference |
| 4/29/2009 |
| Akron | 3 | at | #25 Ohio State | 7 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Creighton | 12 | at | Iowa | 3 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Eastern Michigan | 5 | at | Michigan State | 6 | FINAL | Box Score | Recap | 8 innings (makeup of 4/28 game) |
| 4/29/2009 |
| Eastern Michigan | 6 | at | Michigan State | 1 | FINAL | Box Score | Recap | 7 innings |
| 4/29/2009 |
| Illinois | 10 | at | Indiana State | 11 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| LaSalle | 3 | at | Penn State | 9 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Minnesota |
| at | South Dakota State |
| Canceled | | Recap | CCD, impending weather |
| 4/29/2009 |
| Western Illinois | 2 | at | Indiana | 17 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Wisconsin-Milwaukee | 7 | at | Northwestern | 2 | FINAL | Box Score | Recap | |
| Big 12 Conference |
| 4/29/2009 |
| North Dakota | 1 | at | #23 Kansas State | 22 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| UTSA | 7 | at | #24 Baylor | 8 | FINAL | Box Score | Recap | makeup of 4/28 game |
| 4/29/2009 |
| Bacone |
| at | #26 Oklahoma State |
| Canceled | | Recap | CCD, rain |
| 4/29/2009 |
| Missouri |
| at | Missouri State |
| Canceled | | Recap | CCD, impending weather |
| 4/29/2009 |
| New Mexico | 5 | at | Nebraska | 9 | FINAL | Box Score | Recap | |
| Big East Conference |
| 4/29/2009 |
| Bowling Green State | 6 | at | Notre Dame | 11 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Connecticut | 9 | at | Central Connecticut State | 7 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Fairleigh Dickinson | 10 | at | St. John's | 12 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Maryland | 8 | at | West Virginia | 7 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Monmouth | 6 | at | Rutgers | 4 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Pittsburgh | 10 | at | Cleveland State | 0 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| St. Peter's | 5 | at | Seton Hall | 6 | FINAL | Box Score | Recap | 11 innings |
| 4/29/2009 |
| UCF | 3 | at | South Florida | 9 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Xavier | 3 | at | Cincinnati | 19 | FINAL | Box Score | Recap | |
| Big South Conference |
| 4/29/2009 |
| Wake Forest | 5 | at | #22 Coastal Carolina | 18 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| James Madison | 8 | at | VMI | 5 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| North Carolina A&T | 4 | at | Gardner-Webb | 16 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Radford | 4 | at | Virginia Tech | 10 | FINAL | Box Score | Recap | makeup of 3/3 game |
| 4/29/2009 |
| UNC Asheville |
| at | Appalachian State |
| Canceled | | Recap | CCD, rain |
| 4/29/2009 |
| UNC Greensboro | 9 | at | High Point | 7 | FINAL | Box Score | Recap | 12 innings |
| Big West Conference |
| 4/29/2009 |
| Southern California | 9 | at | #6 Cal State Fullerton | 3 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| #16 Cal Poly | 4 | at | St. Mary's | 7 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Cal State Northridge | 8 | at | UNLV | 2 | FINAL | Box Score | Recap | |
| Colonial Athletic Association |
| 4/29/2009 |
| Rider | 13 | at | #28 George Mason | 6 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Delaware State | 9 | at | Towson | 10 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| George Washington | 6 | at | William and Mary | 7 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Hofstra | 5 | at | New York Tech | 6 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| James Madison | 8 | at | VMI | 5 | FINAL | Box Score | Recap | |
| Conference USA |
| 4/29/2009 |
| Texas A&M-Corpus Christi | 2 | at | #3 Rice | 14 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Tulane | 2 | at | #5 LSU | 13 | FINAL | Box Score | Recap | 7 innings, run rule (makeup of 4/28 game) |
| 4/29/2009 |
| Houston | 6 | at | McNeese State | 3 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Marshall | 8 | at | Youngstown State | 6 | FINAL | Box Score | Recap | 10 innings |
| 4/29/2009 |
| Marshall | 5 | at | Youngstown State | 8 | FINAL | Box Score | Recap | 7 innings |
| 4/29/2009 |
| UCF | 3 | at | South Florida | 9 | FINAL | Box Score | Recap | |
| Division I Independents |
| 4/29/2009 |
| Houston Baptist |
| at | #18 TCU |
| Canceled | | Recap | CCD, field conditions |
| 4/29/2009 |
| North Dakota | 1 | at | #23 Kansas State | 22 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Bryant | 3 | at | Brown | 7 | FINAL | Box Score | Recap | 7 innings |
| 4/29/2009 |
| Bryant | 1 | at | Brown | 2 | FINAL | Box Score | Recap | 7 innings |
| 4/29/2009 |
| Cornell |
| at | LeMoyne |
| Canceled | | Recap | CCD, scheduling conflict |
| 4/29/2009 |
| Hofstra | 5 | at | New York Tech | 6 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Loyola Marymount | 13 | at | Cal State Bakersfield | 2 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Northern Colorado | 7 | at | Air Force | 6 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Southern Illinois-Edwardsville | 2 | at | Bradley | 1 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| St. Joseph's | 7 | at | New Jersey Tech | 10 | FINAL | Box Score | Recap | |
| Horizon League |
| 4/29/2009 |
| Marshall | 8 | at | Youngstown State | 6 | FINAL | Box Score | Recap | 10 innings |
| 4/29/2009 |
| Marshall | 5 | at | Youngstown State | 8 | FINAL | Box Score | Recap | 7 innings |
| 4/29/2009 |
| Pittsburgh | 10 | at | Cleveland State | 0 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Valparaiso | 12 | at | Northern Illinois | 2 | FINAL | Box Score | Recap | makeup of 3/31 game |
| 4/29/2009 |
| Wisconsin-Milwaukee | 7 | at | Northwestern | 2 | FINAL | Box Score | Recap | |
| Ivy League |
| 4/29/2009 |
| Bryant | 3 | at | Brown | 7 | FINAL | Box Score | Recap | 7 innings |
| 4/29/2009 |
| Bryant | 1 | at | Brown | 2 | FINAL | Box Score | Recap | 7 innings |
| 4/29/2009 |
| Cornell |
| at | LeMoyne |
| Canceled | | Recap | CCD, scheduling conflict |
| 4/29/2009 |
| Dartmouth | 0 | at | Boston College | 3 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Princeton | 0 | at | Cornell | 9 | FINAL | Box Score | Recap | Gehrig Division Playoff, Ithaca, NY |
| Metro Atlantic Athletic Conference |
| 4/29/2009 |
| Rider | 13 | at | #28 George Mason | 6 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Buffalo | 2 | at | Canisius | 6 | FINAL | Box Score | Recap | Big Four Classic, Buffalo, NY |
| 4/29/2009 |
| Iona | 9 | at | Wagner | 8 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Manhattan | 15 | at | Albany | 13 | FINAL | Box Score | Recap | 12 innings |
| 4/29/2009 |
| Marist | 3 | vs | Army | 10 | FINAL | Box Score | Recap | Hudson Valley Classic, Fishkill, NY |
| 4/29/2009 |
| Niagara | 2 | vs | St. Bonaventure | 4 | FINAL | Box Score | Recap | Big Four Classic, Buffalo, NY |
| 4/29/2009 |
| Rhode Island | 6 | at | Siena | 7 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| St. Peter's | 5 | at | Seton Hall | 6 | FINAL | Box Score | Recap | 11 innings |
| 4/29/2009 |
| Stony Brook | 14 | at | Fairfield | 6 | FINAL | Box Score | Recap | |
| Mid American Conference |
| 4/29/2009 |
| Akron | 3 | at | #25 Ohio State | 7 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Bowling Green State | 6 | at | Notre Dame | 11 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Buffalo | 2 | at | Canisius | 6 | FINAL | Box Score | Recap | Big Four Classic, Buffalo, NY |
| 4/29/2009 |
| Eastern Kentucky | 7 | at | Miami, Ohio | 8 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Eastern Michigan | 5 | at | Michigan State | 6 | FINAL | Box Score | Recap | 8 innings (makeup of 4/28 game) |
| 4/29/2009 |
| Eastern Michigan | 6 | at | Michigan State | 1 | FINAL | Box Score | Recap | 7 innings |
| 4/29/2009 |
| IUPU-Fort Wayne | 3 | at | Ball State | 10 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Kent State | 14 | at | Duquesne | 12 | FINAL | Box Score | Recap | 7 innings |
| 4/29/2009 |
| Kent State | 13 | at | Duquesne | 0 | FINAL | Box Score | Recap | 7 innings |
| 4/29/2009 |
| Otterbein | 3 | at | Ohio | 11 | FINAL | Box Score | Recap | 7 innings |
| 4/29/2009 |
| Otterbein | 1 | at | Ohio | 14 | FINAL | Box Score | Recap | 7 innings |
| 4/29/2009 |
| Toledo | 3 | at | Oakland | 8 | FINAL | Box Score | Recap | 7 innings |
| 4/29/2009 |
| Toledo | 3 | at | Oakland | 7 | FINAL | Box Score | Recap | 7 innings |
| 4/29/2009 |
| Valparaiso | 12 | at | Northern Illinois | 2 | FINAL | Box Score | Recap | makeup of 3/31 game |
| 4/29/2009 |
| Western Michigan |
| at | Illinois State |
| Canceled | | Recap | CCD, field conditions |
| Mid-Eastern Athletic Conference |
| 4/29/2009 |
| Bethune-Cookman | 2 | at | Jacksonville | 3 | FINAL | Box Score | Recap | 10 innings |
| 4/29/2009 |
| Delaware State | 9 | at | Towson | 10 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| North Carolina A&T | 4 | at | Gardner-Webb | 16 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| UMES |
| at | Mount St. Mary's |
| Canceled | | Recap | CCD |
| 4/29/2009 |
| UMES |
| at | Mount St. Mary's |
| Canceled | | Recap | CCD |
| Missouri Valley Conference |
| 4/29/2009 |
| Creighton | 12 | at | Iowa | 3 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Illinois | 10 | at | Indiana State | 11 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Missouri |
| at | Missouri State |
| Canceled | | Recap | CCD, impending weather |
| 4/29/2009 |
| Southern Illinois |
| at | Eastern Illinois |
| Canceled | | Recap | CCD, field conditions (Mattoon, IL) |
| 4/29/2009 |
| Southern Illinois-Edwardsville | 2 | at | Bradley | 1 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Western Michigan |
| at | Illinois State |
| Canceled | | Recap | CCD, field conditions |
| 4/29/2009 |
| Wichita State |
| at | Oral Roberts |
| Canceled | | Recap | CCD, rain |
| Mountain West Conference |
| 4/29/2009 |
| Houston Baptist |
| at | #18 TCU |
| Canceled | | Recap | CCD, field conditions |
| 4/29/2009 |
| Cal State Northridge | 8 | at | UNLV | 2 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| New Mexico | 5 | at | Nebraska | 9 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Northern Colorado | 7 | at | Air Force | 6 | FINAL | Box Score | Recap | |
| Northeast Conference |
| 4/29/2009 |
| Connecticut | 9 | at | Central Connecticut State | 7 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Fairleigh Dickinson | 10 | at | St. John's | 12 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Iona | 9 | at | Wagner | 8 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Monmouth | 6 | at | Rutgers | 4 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| UMES |
| at | Mount St. Mary's |
| Canceled | | Recap | CCD |
| 4/29/2009 |
| UMES |
| at | Mount St. Mary's |
| Canceled | | Recap | CCD |
| Ohio Valley Conference |
| 4/29/2009 |
| Jacksonville State | 16 | at | #7 Georgia | 8 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Austin Peay State | 13 | at | Middle Tennessee State | 18 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Eastern Kentucky | 7 | at | Miami, Ohio | 8 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Murray State | 12 | at | Belmont | 3 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Southeast Missouri State |
| at | Central Arkansas |
| Canceled | | Recap | CCD, impending weather |
| 4/29/2009 |
| Southern Illinois |
| at | Eastern Illinois |
| Canceled | | Recap | CCD, field conditions (Mattoon, IL) |
| 4/29/2009 |
| Tennessee Tech | 0 | at | Western Carolina | 11 | FINAL | Box Score | Recap | |
| Pac 10 Conference |
| 4/29/2009 |
| #2 Arizona State | 20 | at | Arizona | 3 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Southern California | 9 | at | #6 Cal State Fullerton | 3 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Gonzaga |
| at | Washington State |
| Canceled | | Recap | CCD, impending weather (makeup of 2/24 game) |
| 4/29/2009 |
| Sacramento State | 4 | at | Stanford | 6 | FINAL | Box Score | Recap | |
| Patriot League |
| 4/29/2009 |
| Holy Cross | 4 | at | Maine | 10 | FINAL | Box Score | Recap | makeup of 4/22 game (Sanford, ME) |
| 4/29/2009 |
| Lafayette | 10 | at | Temple | 6 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Marist | 3 | vs | Army | 10 | FINAL | Box Score | Recap | Hudson Valley Classic, Fishkill, NY |
| Southeastern Conference |
| 4/29/2009 |
| Tulane | 2 | at | #5 LSU | 13 | FINAL | Box Score | Recap | 7 innings, run rule (makeup of 4/28 game) |
| 4/29/2009 |
| Jacksonville State | 16 | at | #7 Georgia | 8 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Arkansas-Pine Bluff | 2 | at | #8 Mississippi | 22 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| South Alabama | 3 | at | #27 Alabama | 14 | FINAL | Box Score | Recap | 8 innings, run rule |
| 4/29/2009 |
| Auburn | 13 | at | Troy | 8 | FINAL | Box Score | Recap | makeup of 3/25 game |
| Southern Conference |
| 4/29/2009 |
| Alabama A&M | 3 | at | Samford | 7 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Georgia Southern | 10 | at | Kennesaw State | 13 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Georgia Southern | 12 | at | Kennesaw State | 6 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Tennessee Tech | 0 | at | Western Carolina | 11 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| UNC Asheville |
| at | Appalachian State |
| Canceled | | Recap | CCD, rain |
| 4/29/2009 |
| UNC Greensboro | 9 | at | High Point | 7 | FINAL | Box Score | Recap | 12 innings |
| Southland Conference |
| 4/29/2009 |
| Texas A&M-Corpus Christi | 2 | at | #3 Rice | 14 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| UTSA | 7 | at | #24 Baylor | 8 | FINAL | Box Score | Recap | makeup of 4/28 game |
| 4/29/2009 |
| Houston | 6 | at | McNeese State | 3 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Jackson State | 6 | at | Southeastern Louisiana | 20 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Louisiana-Lafayette | 5 | at | Northwestern State | 7 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Louisiana-Monroe | 7 | at | Lamar | 12 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Nicholls State | 11 | at | New Orleans | 5 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Sam Houston State |
| at | Prairie View A&M |
| Canceled | | Recap | CCD, field conditions |
| 4/29/2009 |
| Southeast Missouri State |
| at | Central Arkansas |
| Canceled | | Recap | CCD, impending weather |
| Southwestern Athletic Conference |
| 4/29/2009 |
| Arkansas-Pine Bluff | 2 | at | #8 Mississippi | 22 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Alabama A&M | 3 | at | Samford | 7 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Jackson State | 6 | at | Southeastern Louisiana | 20 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Mississippi Valley State | 10 | at | Grambling State | 11 | FINAL | Box Score | | |
| 4/29/2009 |
| Sam Houston State |
| at | Prairie View A&M |
| Canceled | | Recap | CCD, field conditions |
| Summit League |
| 4/29/2009 |
| Dakota State |
| at | North Dakota State |
| Canceled | | Recap | CCD, rain |
| 4/29/2009 |
| IUPU-Fort Wayne | 3 | at | Ball State | 10 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Minnesota |
| at | South Dakota State |
| Canceled | | Recap | CCD, impending weather |
| 4/29/2009 |
| Toledo | 3 | at | Oakland | 8 | FINAL | Box Score | Recap | 7 innings |
| 4/29/2009 |
| Toledo | 3 | at | Oakland | 7 | FINAL | Box Score | Recap | 7 innings |
| 4/29/2009 |
| Western Illinois | 2 | at | Indiana | 17 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Wichita State |
| at | Oral Roberts |
| Canceled | | Recap | CCD, rain |
| Sun Belt Conference |
| 4/29/2009 |
| South Alabama | 3 | at | #27 Alabama | 14 | FINAL | Box Score | Recap | 8 innings, run rule |
| 4/29/2009 |
| Auburn | 13 | at | Troy | 8 | FINAL | Box Score | Recap | makeup of 3/25 game |
| 4/29/2009 |
| Austin Peay State | 13 | at | Middle Tennessee State | 18 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Florida International | 3 | at | Stetson | 7 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Louisiana-Lafayette | 5 | at | Northwestern State | 7 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Louisiana-Monroe | 7 | at | Lamar | 12 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Nicholls State | 11 | at | New Orleans | 5 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Western Kentucky | 9 | at | Lipscomb | 3 | FINAL | Box Score | Recap | |
| West Coast Conference |
| 4/29/2009 |
| #16 Cal Poly | 4 | at | St. Mary's | 7 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Gonzaga |
| at | Washington State |
| Canceled | | Recap | CCD, impending weather (makeup of 2/24 game) |
| 4/29/2009 |
| Loyola Marymount | 13 | at | Cal State Bakersfield | 2 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Santa Clara | 6 | at | San Jose State | 7 | FINAL | Box Score | Recap | 10 innings (makeup of 3/1 game) |
| Western Athletic Conference |
| 4/29/2009 |
| Sacramento State | 4 | at | Stanford | 6 | FINAL | Box Score | Recap | |
| 4/29/2009 |
| Santa Clara | 6 | at | San Jose State | 7 | FINAL | Box Score | Recap | 10 innings (makeup of 3/1 game) |